BioGateway cytoscape-app issues

BioGateway / cytoscape-app

The Cytoscape App for BioGateway

https://www.biogateway.eu

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issues

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Dev

#50 sholmas opened 1 year ago
0
Bump testng from 6.13.1 to 7.5.1

#49 dependabot[bot] opened 1 year ago
0
Bump testng from 6.13.1 to 7.7.0

#48 dependabot[bot] closed 1 year ago
1
Network as set

#47 sholmas closed 1 year ago
0
Changed URL of config file

#46 sholmas closed 1 year ago
0
Network as set

#45 sholmas closed 2 years ago
0
Bump gson from 2.8.2 to 2.8.9

#44 dependabot[bot] opened 2 years ago
0
Bump httpclient from 4.4.1 to 4.5.13

#43 dependabot[bot] opened 3 years ago
0
Landing pages

#42 makuintnu opened 3 years ago
0
[Bulk Search] Entities that was not found are no longer highlighted in red

#41 sholmas opened 4 years ago
0
[Query Builder] New query constraints are not applied to existing query builder windows.

#40 sholmas opened 4 years ago
0
query for high confidence tfac2gene links only

#39 makuintnu closed 4 years ago
2
loading metadata

#38 makuintnu closed 4 years ago
2
tfac2gene sources

#37 makuintnu closed 4 years ago
1
Casting the results to a hashset before returning them to sanitize nu…

#36 sholmas closed 4 years ago
0
[Beta] App fails to load more than 500 entries for some queries.

#35 sholmas closed 4 years ago
0
Fixes #31

#34 sholmas closed 4 years ago
0
Renamed the package to shorten it a bit.

#33 sholmas closed 4 years ago
0
Renamed the package to shorten it a bit.

#32 sholmas closed 4 years ago
0
Annotation scores support in Nodes

#31 sholmas closed 4 years ago
0
[Beta] Large queries like Example 1e (without taxon restriction) crashes with "Connection reset"

#30 sholmas closed 4 years ago
2
BioGateway Control panel names

#29 makuintnu closed 4 years ago
1
default setting Query Builder

#28 makuintnu closed 4 years ago
1
Clean up queries code

#27 sholmas opened 4 years ago
0
Searching from Node

#26 makuintnu opened 4 years ago
1
Biogateway Node lookup

#25 makuintnu opened 4 years ago
1
Sparql to text

#24 sholmas closed 4 years ago
0
As a user I would like to share queries with others easily without sending the text files.

#23 sholmas closed 4 years ago
1
Closes #21. Enables right-clicking on edges to expand and open source URIs

#22 sholmas closed 4 years ago
0
[Cytoscape 3.8.0] Double-clicking expandable edges does not work.

#21 sholmas closed 4 years ago
0
[Autocomplete] Typing is unresponsive when internet connection is slow.

#20 sholmas opened 4 years ago
0
Closes #18. Closes #13. Closes #7.

#19 sholmas closed 4 years ago
0
[Taxonfilter] Bulk Query does not care about taxons.

#18 sholmas closed 4 years ago
0
Closes #15, closes #16.

#17 sholmas closed 4 years ago
0
Taxon name should be shown in the query results tab

#16 sholmas closed 4 years ago
0
Taxon name should be shown in the node table of proteins and genes.

#15 sholmas closed 4 years ago
0
Dev

#14 sholmas closed 4 years ago
0
[Taxonfilter] QueryBuilder queries should be constrained to active taxa

#13 sholmas closed 4 years ago
0
Exception: Invalid parameter count!

#12 sholmas closed 4 years ago
0
ControlPanel scroll bars does not work

#11 sholmas closed 4 years ago
0
Closes #6. The autocomplete search will now add active taxa to the search.

#10 sholmas closed 4 years ago
0
Closes #4.

#9 sholmas closed 4 years ago
0
Fixed #4, an issue where nodetypes without metadatagraph set could not be…

#8 sholmas closed 4 years ago
0
[Taxonfilter] Right-click queries should be constrained to active taxa

#7 sholmas closed 4 years ago
0
[Taxonfilter] Autocomplete should be constrained to selected taxa

#6 sholmas closed 4 years ago
0
[Taxonfilter] The user should be able to select the taxa they want to filter for

#5 sholmas closed 4 years ago
0
[Statements] Collapsing an expanded node fails if it does not have a metadatagraph set in XML.

#4 sholmas closed 4 years ago
0
Fixes #1

#3 sholmas closed 4 years ago
0
[Autocomplete] Pressing enter without selecting an entity no longer selects the top entry.

#2 sholmas closed 4 years ago
1
GO-Terms is loaded with "Undefined" type when using dev instance.

#1 sholmas closed 4 years ago
0