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BioHPC / MegaR

megaR: An Interactive R Package for Metagenomic Sample Classification and Disease Prediction using Microbiota and Machine Learning
GNU General Public License v3.0
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MegaR dependencies.. #1

Open fahimish opened 3 years ago

fahimish commented 3 years ago

Hi, While installing MegaR for a testdrive (as teaching tool for metagenomics), I faced this issue.

install.packages("~/Downloads/MegaR_1.0.tar.gz", repos = NULL, type = "source", dependencies = TRUE) Installing package into ‘/home/fahim/R/x86_64-pc-linux-gnu-library/3.6’ (as ‘lib’ is unspecified) ERROR: dependencies ‘shinythemes’, ‘shinydashboard’, ‘randomForest’, ‘caret’, ‘MLeval’, ‘edgeR’, ‘kernlab’ are not available for package ‘MegaR’

  • removing ‘/home/fahim/R/x86_64-pc-linux-gnu-library/3.6/MegaR’ Warning in install.packages : installation of package ‘/home/fahim/Downloads/MegaR_1.0.tar.gz’ had non-zero exit status

Penny for your thoughts... Cheers

fahimish commented 3 years ago

Ok. That was easy.. installed all those packages and its installed now.