Closed TransGirlCodes closed 7 years ago
This doesn't pass the CI tests. Please do not merge changes before passing CI.
Sorry, as far as I could tell, this was due to tests for another submodule, I think Bio.Align (maybe Bio.Var too), which is being extracted to BioAlignments anyway, so I thought it was of little consequence. I think it might be tricky to decompose some of the submodules without making the CI fail temporarily, where they depend on each other. If you would like, I can make the Bio.Align tests work again in another PR 👍
The failure you saw may be due to the change you added to test/align/runtests.jl. You removed whitespaces in tests but some tests are actually whitespace-aware. That may solve, at least part of, the CI failure.
This PR adds BioSequences 0.6 as a dependency and completes the move of that code out to BioSequences.jl by removing the
seq
folder insrc
. Now Bio.Seq re-exports BioSequences.jl instead.