Broken Contributing link

BioJulia / Bio.jl

[DEPRECATED] Bioinformatics and Computational Biology Infrastructure for Julia

http://biojulia.dev

MIT License

261 stars 65 forks source link

Broken Contributing link #489

Closed miguelraz closed 4 years ago

miguelraz commented 6 years ago

The guidelines here are borked

TransGirlCodes commented 6 years ago

Thanks for flagging this @miguelraz, this is an artefact of the old gh-pages setup we had before all package pages linked to to same contributing site. I'm going to try and push Bio.jl to a new version compatible with all the latest changes to BioJulia package structure this week, I will include this on the list.

samusz commented 5 years ago

I believe the link should be : https://github.com/BioJulia/Contributing/blob/master/CONTRIBUTING.md

kescobo commented 5 years ago

@BenJWard can you also point to a template setup - I've been having issues getting my packages docs deployed.

TransGirlCodes commented 5 years ago

@kescobo Which package is giving you docs grief?

kescobo commented 5 years ago

@BenJWard The 3 packages I spend the most time with:

Microbiome.jl is deployed but hasn't been updating for months.
BiobakeryUtils and MicrobiomePlots aren't getting deployed

TransGirlCodes commented 5 years ago

@kescobo Ok I'll see if I can spot anything, I know Documenter did make some significant changes recently, including I think to deployment. Sometimes in the past when docs failed for me for BioSequences I would just redo the setup and it would work, presumably whichever issue I could not identify got fixed if I just nuked the setup and did it again per the manual's very latest instructions.

TransGirlCodes commented 5 years ago

@kescobo MicrobiomePlot is now getting deployed. I'll have a look at the other two over the course of today. There wasn't any one particular issue as I suspected, but how to control deployment has changed quite a bit in the details so I reset deployment and it works now. I'll take a look at Microbiome and BiobakeryUtils next

TransGirlCodes commented 5 years ago

@kescobo Microbiome docs is now working. Biobakery utils has an issue at the install stage in travis in OSX that you will have to fix before any docs will get built.