I am testing the PWM and PFM function. But when I tested just one DNA sequence I had problems, but 1 sequence within a vector does not present an error.
See:
dna1 = dna"TCA"
pfm = PFM(dna1)
ArgumentError: sequence element must be DNA or RNA
Stacktrace:
[1] PFM(set::Vector{DNA})
@ BioSequences C:\Users\Planck\.julia\packages\BioSequences\bYmYY\src\search\pwm.jl:50
[2] PFM(set::LongSequence{DNAAlphabet{4}})
@ BioSequences C:\Users\Planck\.julia\packages\BioSequences\bYmYY\src\search\pwm.jl:42
[3] top-level scope
@ In[22]:2
Now if I do:
dna1 = dna"TCA"
pfm = PFM([dna1])
4×3 PFM{DNA, Int64}:
A 0 0 1
C 0 1 0
G 0 0 0
T 1 0 0
Hi,
I am testing the PWM and PFM function. But when I tested just one DNA sequence I had problems, but 1 sequence within a vector does not present an error. See:
Now if I do:
Is there any reason? thanks