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BioJulia
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GenomeGraphs.jl
A modern genomics framework for julia
https://biojulia.dev
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Support Julia LTS version
#29
TransGirlCodes
closed
4 years ago
1
Update GenomeGraphs to use KmerAnalysis.jl
#28
TransGirlCodes
closed
4 years ago
1
CompatHelper: bump compat for "ReadDatastores" to "0.3"
#27
github-actions[bot]
closed
4 years ago
1
Fixes to compat bump
#26
TransGirlCodes
closed
4 years ago
2
CompatHelper: bump compat for "ReadDatastores" to "0.2"
#25
github-actions[bot]
closed
4 years ago
1
Kmer count comparrisons
#24
TransGirlCodes
closed
4 years ago
1
WorkSpace persistency and IO
#23
TransGirlCodes
closed
4 years ago
0
Short Read Mapper
#22
TransGirlCodes
opened
4 years ago
0
CompatHelper: add new compat entry for "ReadDatastores" at version "0.1"
#21
github-actions[bot]
closed
4 years ago
1
CompatHelper: add new compat entry for "FASTX" at version "1.1"
#20
github-actions[bot]
closed
4 years ago
1
CompatHelper: add new compat entry for "Automa" at version "0.8"
#19
github-actions[bot]
closed
4 years ago
1
Add draft of MerTools submodule
#18
TransGirlCodes
closed
4 years ago
1
Reorganise some code into "Graphs" submodule
#17
TransGirlCodes
closed
4 years ago
0
Implement draft of perfect circle resolution for the dbg constructor
#16
TransGirlCodes
closed
4 years ago
0
Merge tip-clipping from GSoC into GenomeGraphs framework
#15
TransGirlCodes
closed
4 years ago
0
Basic serial, in memory kmer counting
#14
TransGirlCodes
closed
5 years ago
1
Graph construction is currently subject to the circle problem
#13
TransGirlCodes
closed
4 years ago
0
Error Correction
#12
ardakdemir
closed
4 years ago
4
Adversarial testing datasets: PhiX
#11
TransGirlCodes
closed
4 years ago
1
Create basic SequenceDistanceGraph and DBG building based on Arda's code
#10
TransGirlCodes
closed
5 years ago
4
Generating Contigs using UG and Reads
#9
ardakdemir
closed
4 years ago
7
Gsoc/dbg
#8
ardakdemir
closed
5 years ago
3
De-Bruijn Graph
#7
TransGirlCodes
closed
5 years ago
2
Checking the last updates
#6
ardakdemir
closed
4 years ago
0
Node merging and Edge Collapsing
#5
ardakdemir
closed
4 years ago
2
Maybe a typo in SequenceGraph.jl
#4
ardakdemir
closed
4 years ago
1
Error when including BioSequenceGraphs.jl
#3
ardakdemir
closed
5 years ago
2
Typo in Links.jl
#2
ardakdemir
closed
4 years ago
8
Basic De-Bruijn Graph type
#1
TransGirlCodes
closed
4 years ago
5