Is there any function available in Phylogenies.jl to read phylogenetic trees from xml file?

BioJulia / Phylogenies.jl

The BioJulia package for working with phylogenetic trees and geneologies.

MIT License

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Open efmanu opened 3 years ago

efmanu commented 3 years ago

Hi, I am looking for a function to read phylogenetic trees from xml file, something similar to following python implementation:

from Bio import Phylo
# download this from http://www.phyloxml.org/examples/apaf.xml
tree = Phylo.read('apaf.xml', 'phyloxml')

Can anyone reply?

kescobo commented 3 years ago

Not sure, but there's also Phylo.jl in the EcoJulia org, you might look there