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BioJulia
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PopGen.jl
Population Genetics in Julia
https://biojulia.github.io/PopGen.jl/
MIT License
47
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16
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CompatHelper: bump compat for NamedArrays to 0.10, (keep existing compat)
#119
github-actions[bot]
opened
1 year ago
0
CompatHelper: bump compat for MultipleTesting to 0.6, (keep existing compat)
#118
github-actions[bot]
opened
1 year ago
0
add FST unit tests [feature]
#117
pdimens
opened
1 year ago
0
[bug] parallel addition must use atomic values (or Locks)
#116
pdimens
opened
1 year ago
0
CompatHelper: bump compat for StatsBase to 0.34, (keep existing compat)
#115
github-actions[bot]
closed
1 year ago
0
pull hotfixes
#114
pdimens
closed
1 year ago
0
Update URLs from biojulia.net to biojulia.dev
#113
kescobo
closed
1 year ago
0
CompatHelper: bump compat for Clustering to 0.15, (keep existing compat)
#112
github-actions[bot]
closed
1 year ago
0
CompatHelper: bump compat for Term to 2, (keep existing compat)
#111
github-actions[bot]
closed
1 year ago
0
CompatHelper: bump compat for MultivariateStats to 0.10, (keep existing compat)
#110
github-actions[bot]
closed
1 year ago
0
[feature] Merge all PopGen_.jl packages under PopGen.jl monorepo
#109
pdimens
opened
2 years ago
0
CompatHelper: bump compat for MultivariateStats to 0.10, (keep existing compat)
#108
github-actions[bot]
closed
2 years ago
0
CompatHelper: bump compat for PopGenCore to 0.6, (keep existing compat)
#107
github-actions[bot]
closed
2 years ago
0
CompatHelper: bump compat for Term to 1, (keep existing compat)
#106
github-actions[bot]
closed
2 years ago
0
CompatHelper: add new compat entry for TSne at version 1, (keep existing compat)
#105
github-actions[bot]
closed
2 years ago
0
CompatHelper: add new compat entry for StatsBase at version 0.33, (keep existing compat)
#104
github-actions[bot]
closed
2 years ago
0
CompatHelper: add new compat entry for Term at version 0.3, (keep existing compat)
#103
github-actions[bot]
closed
2 years ago
0
CompatHelper: add new compat entry for OnlineStats at version 1, (keep existing compat)
#102
github-actions[bot]
closed
2 years ago
0
CompatHelper: add new compat entry for NamedArrays at version 0.9, (keep existing compat)
#101
github-actions[bot]
closed
2 years ago
0
add cluster() wrapper
#100
pdimens
closed
2 years ago
0
add more clustering methods
#99
pdimens
closed
2 years ago
0
CompatHelper: add new compat entry for Clustering at version 0.14, (keep existing compat)
#98
github-actions[bot]
closed
2 years ago
0
Pca
#97
pdimens
closed
2 years ago
0
[feature] replace ProgressMeter with Term.jl ProgressBar
#96
pdimens
closed
2 years ago
1
[feature] PCA and DAPC
#95
pdimens
opened
3 years ago
0
permutations for fst shuffle indices and return views
#94
pdimens
closed
3 years ago
1
[feature] standardize function names
#93
pdimens
closed
3 years ago
0
Request: Explain populations!(::Vector) better
#92
jakobnissen
closed
3 years ago
3
CompatHelper: add new compat entry for PopGenCore at version 0.2, (keep existing compat)
#91
github-actions[bot]
closed
3 years ago
0
CompatHelper: add new compat entry for Reexport at version 1, (keep existing compat)
#90
github-actions[bot]
closed
3 years ago
0
CompatHelper: bump compat for PopGenCore to 0.2, (keep existing compat)
#89
github-actions[bot]
closed
3 years ago
0
CompatHelper: add new compat entry for PopGenCore at version 0.2, (keep existing compat)
#88
github-actions[bot]
closed
3 years ago
0
[feature] locus-by-locus pairwise FST
#87
pdimens
closed
3 years ago
1
CompatHelper: add new compat entry for Reexport at version 1, (keep existing compat)
#86
github-actions[bot]
closed
3 years ago
0
CompatHelper: add new compat entry for PopGenCore at version 0.1, (keep existing compat)
#85
github-actions[bot]
closed
3 years ago
0
[feature] speed up fst permutations
#84
pdimens
closed
3 years ago
0
[feature] remove `release` branch
#83
pdimens
closed
3 years ago
0
[feature] Split file IO into separate package
#82
pdimens
closed
3 years ago
2
[feature] add PLINK file import support
#81
pdimens
closed
3 years ago
1
CompatHelper: add new compat entry for "NaturalSort" at version "1"
#80
github-actions[bot]
closed
3 years ago
0
push 0.6.5 to release
#79
pdimens
closed
3 years ago
0
[bug] export keep and keep!
#78
pdimens
closed
3 years ago
0
[feature] consolidate file import info text
#77
pdimens
closed
3 years ago
0
[bug] PopData.meta.name incorrectly typed from vcf import
#76
pdimens
closed
3 years ago
0
[bug] isbiallelic(::PopData) returns incorrect answer
#75
pdimens
closed
3 years ago
1
[feature] add NaturalSort.jl as dep
#74
pdimens
closed
3 years ago
0
CompatHelper: bump compat for "MultipleTesting" to "0.5"
#73
github-actions[bot]
closed
3 years ago
0
add DataFrames 1.x compat
#72
pdimens
closed
3 years ago
1
[feature] Compatibility with DataFrames v1
#71
hannesbecher
closed
3 years ago
4
CompatHelper: bump compat for "DataFrames" to "1.1"
#70
github-actions[bot]
closed
3 years ago
0
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