Converge SAM and BAM records

BioJulia / XAM.jl

Parse and process SAM and BAM formatted files

MIT License

27 stars 13 forks source link

Open jakobnissen opened 4 years ago

jakobnissen commented 4 years ago

Make SAM and BAM records display similarly A SAM and BAM record contain basically the same information. So they should be displayed similarly in the REPL.
Create SAM-to-BAM conversion functions This is a little harder, but probably worthwhile.

CiaranOMara commented 4 years ago

Make SAM and BAM records display similarly

Create SAM-to-BAM conversion functions

CiaranOMara commented 4 years ago

A SAM and BAM record contain basically the same information. So they should be displayed similarly in the REPL.

As a starting point what about displaying the underlined words in uppercase as listed in section 4.2 of https://samtools.github.io/hts-specs/SAMv1.pdf ?

jakobnissen commented 4 years ago

That's a good idea.