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BioOmics / iSeq

Download sequencing data and metadata from GSA, SRA, ENA, and DDBJ databases.
https://anaconda.org/bioconda/iseq
MIT License
126 stars 9 forks source link

merging by sample name #2

Closed nicolo-tellini closed 5 months ago

nicolo-tellini commented 5 months ago

Dear @BioOmics ,

is there any option for merging fastqs based on sample ID instead of experiment ID?

thanks

best

nic

BioOmics commented 5 months ago

Dear @nicolo-tellini ,

Thank you for using iSeq. I apologize that currently iSeq does not have parameters to support the merging of Sample IDs. However, I am aware of another software that can fulfill your requirements, and that is fastq-dl.

Best

nicolo-tellini commented 5 months ago

@BioOmics

What do you think about it as a new feature to implement?

BioOmics commented 5 months ago

@nicolo-tellini

Great suggestion, I'll definitely consider implementing it in the next version. Thank you!