The package provides a set of R functions for interacting with BioPAX OWL files using Paxtools and the querying Pathway Commons (PC) molecular interaction database
results <- readGmt(system.file("extdata", "test_gea.gmt", package="paxtoolsr"))
Warning message:
In file(con, "r") :
file("") only supports open = "w+" and open = "w+b": using the former
A cleaner error could be produced