BioSina / Panakeia

Prokaryotic Pangenome Analysis
GNU General Public License v3.0
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Clustering.py: command not found #3

Open marianajeeb opened 1 year ago

marianajeeb commented 1 year ago

Hi,

I am trying to run Panakeia. I have downloaded all prerequisites in conda environment showing below; _libgcc_mutex 0.1 conda_forge conda-forge _openmp_mutex 4.5 2_gnu conda-forge bzip2 1.0.8 h7f98852_4 conda-forge ca-certificates 2022.12.7 ha878542_0 conda-forge cd-hit 4.8.1 h5b5514e_7 bioconda ld_impl_linux-64 2.40 h41732ed_0 conda-forge libffi 3.4.2 h7f98852_5 conda-forge libgcc-ng 12.2.0 h65d4601_19 conda-forge libgomp 12.2.0 h65d4601_19 conda-forge libnsl 2.0.0 h7f98852_0 conda-forge libsqlite 3.40.0 h753d276_0 conda-forge libstdcxx-ng 12.2.0 h46fd767_19 conda-forge libuuid 2.32.1 h7f98852_1000 conda-forge libzlib 1.2.13 h166bdaf_4 conda-forge ncurses 6.3 h27087fc_1 conda-forge networkx 3.0 pypi_0 pypi openssl 3.1.0 h0b41bf4_0 conda-forge pip 23.0.1 pyhd8ed1ab_0 conda-forge python 3.11.0 he550d4f_1_cpython conda-forge readline 8.2 h8228510_1 conda-forge setuptools 67.6.0 pyhd8ed1ab_0 conda-forge tk 8.6.12 h27826a3_0 conda-forge tzdata 2023b h71feb2d_0 conda-forge wheel 0.40.0 pyhd8ed1ab_0 conda-forge xz 5.2.6 h166bdaf_0 conda-forge zlib 1.2.13 h166bdaf_4 conda-forge

But when I am trying to run command Clustering.py getting following error.

Clustering.py: command not found

Could you please tell what is the error.

Thanks