BioSystemsUM / troppo

Reconstruction algorithms for Python
GNU General Public License v3.0
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GIMME doesn't work properly. #19

Closed AlirezaShokrollahi closed 1 year ago

AlirezaShokrollahi commented 1 year ago

Dear Developers of TROPPO, Hello, I am using your library, Troppo, in my work. When I used GIMME, I saw this warning three times: Could not set parameters with this solver. Also, I found that there are some problems in the algorithm, I can't see the effect of obj_frac, and increasing the flux_threshold causes the model_GIMME_final.optimize() to become zero. Best regards, Thank you for your attention.