Extremely low GPU utilization

BioX-NKU / scButterfly

A versatile single-cell cross-modality translation method via dual-aligned variational autoencoders

MIT License

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Extremely low GPU utilization #3

Open fsccycy opened 5 months ago

fsccycy commented 5 months ago

I just followed the tutorial to run the example code, but the model was running with less than 10% GPU usage. Why is this happening and can it be improved?

caosip commented 5 months ago

Due to the large size of scATAC-seq data, we mainly store the data in the CPU instead of the GPU, and the conversion of batches from CPU to GPU may cause low GPU usage. We apologize that we currently do not have a good solution to this issue.