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Bioconductor / BiocWorkshops2019

The official repository of the Bioconductor 2019 Conference Workshops :confetti_ball:
https://bioconductor.github.io/BiocWorkshops2019/
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[Workshop] ATAC-seq data quality control using the ATACseqQC package #11

Open haibol2016 opened 5 years ago

haibol2016 commented 5 years ago

https://github.com/haibol2016/ATACseqQCWorkshop

LiNk-NY commented 5 years ago

Hi Haibol, @haibol2016 Please make sure you link to a repository containing a build-able and check-able package. Best, Marcel

haibol2016 commented 5 years ago

Hello Marcel,

Thanks for the reminder. It will be changed to correct link by May 27. Haibo

On Fri, May 24, 2019 at 11:47 AM Marcel Ramos notifications@github.com wrote:

Hi Haibol, @haibol2016 https://github.com/haibol2016 Please make sure you link to a repository containing a build-able and check-able package. Best, Marcel

— You are receiving this because you were mentioned. Reply to this email directly, view it on GitHub https://github.com/Bioconductor/BiocWorkshops2019/issues/11?email_source=notifications&email_token=ALR5WDZSCRBHBM5JGHJGMZTPXALYNA5CNFSM4HODHYAKYY3PNVWWK3TUL52HS4DFVREXG43VMVBW63LNMVXHJKTDN5WW2ZLOORPWSZGODWF544I#issuecomment-495705713, or mute the thread https://github.com/notifications/unsubscribe-auth/ALR5WDZPLP3UNFPYUQCYLHTPXALYNANCNFSM4HODHYAA .

seaYali commented 5 years ago

https://github.com/haibol2016/ATACseqQCWorkshop

lpantano commented 5 years ago

Hi @seaYali

Thanks for modified the workshop. It needs one more thing for the figures, they need to be referred as the bib files:

r knitr::include_graphics(system.file(package='dummychapter1', 'vignettes', 'fig.png'))

or

![](rsystem.file(package='dummychapter1', 'vignettes', 'fig.png'))

Can you check all your figures are like that?

Thanks! ``

haibol2016 commented 5 years ago

Thanks. I will change that. I forgot the figures are in a different location now.

Haibo

On Fri, Jun 7, 2019 at 4:25 PM Lorena Pantano notifications@github.com wrote:

Hi @seaYali https://github.com/seaYali

Thanks for modified the workshop. It needs one more thing for the figures, they need to be referred as the bib files:

r knitr::include_graphics(system.file(package='dummychapter1', 'vignettes', 'fig.png'))

or

![](r system.file(package='dummychapter1', 'vignettes', 'fig.png'))

Can you check all your figures are like that?

Thanks! ``

— You are receiving this because you were mentioned. Reply to this email directly, view it on GitHub https://github.com/Bioconductor/BiocWorkshops2019/issues/11?email_source=notifications&email_token=ALR5WD7MWDGBSJFFN3S66DLPZLG5VA5CNFSM4HODHYAKYY3PNVWWK3TUL52HS4DFVREXG43VMVBW63LNMVXHJKTDN5WW2ZLOORPWSZGODXHBCRA#issuecomment-500044100, or mute the thread https://github.com/notifications/unsubscribe-auth/ALR5WD7RTZLINJRBKVVKH3TPZLG5VANCNFSM4HODHYAA .