bioc-issue-bot
commented
5 years ago Hi @zhewa
Thanks for submitting your package. We are taking a quick look at it and you will hear back from us soon.
The DESCRIPTION file for this package is:
Package: celda
Title: CEllular Latent Dirichlet Allocation
Version: 0.99.8
Authors@R: c(person("Joshua", "Campbell", email = "camp@bu.edu", role = c("aut", "cre")),
person("Sean", "Corbett", email = "scorbett@bu.edu", role = c("aut")),
person("Yusuke", "Koga", email="ykoga07@bu.edu", role = c("aut")))
Description: celda leverages Bayesian hierarchical modeling to cluster genes,
cells, or both simultaneously from single cell sequencing data.
Depends:
R (>= 3.5),
SummarizedExperiment
Imports:
plyr,
foreach,
ggplot2,
RColorBrewer,
pheatmap,
grid,
scales,
gtable,
grDevices,
graphics,
matrixStats,
doParallel,
cluster,
digest,
gridExtra,
methods,
reshape2,
MAST,
GenomicRanges,
data.table,
Rcpp,
RcppEigen,
umap,
enrichR
Suggests:
testthat,
knitr,
roxygen2,
rmarkdown,
vcd,
corrplot,
Matrix,
biomaRt,
Rtsne,
covr,
M3DExampleData
LinkingTo: Rcpp, RcppEigen
VignetteBuilder: knitr
License: MIT
Encoding: UTF-8
LazyData: true
RoxygenNote: 6.1.0.9000
BugReports: https://github.com/definitelysean/celda/issues
biocViews: SingleCell, GeneExpression, Clustering, Sequencing, Bayesian
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zhewa
Kayla-Morrell
Update the following URL to point to the GitHub repository of the package you wish to submit to Bioconductor
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This is a re-submission of the package celda. The original submission is here: #910