bioc-issue-bot
commented
4 years ago Hi @josschavezf
Thanks for submitting your package. We are taking a quick look at it and you will hear back from us soon.
The DESCRIPTION file for this package is:
Package: regutools
Title: regutools: an R package for data extraction from RegulonDB
Version: 0.99.0
Date: 2020-02-26
Authors@R: c(
person ("Joselyn", "Chavez", email = "joselynchavezf@gmail.com",
role = c("aut", "cre"), comment = c(ORCID = "0000-0002-4974-4591")),
person("Carmina", "Barberena-Jonas", email = "car.barjon@gmail.com",
role = c("aut", "cre")),
person(c("Jesus", "E."), "Sotelo-Fonseca", email = "jemilianosf@gmail.com",
role = c("aut", "cre")),
person("Jose", "Alquicira-Hernandez", email = "joseah@lcg.unam.mx",
role = c("ctb"), comment = c(ORCID = "0000-0002-9049-7780")),
person("Heladia", "Salgado", email = "heladia@ccg.unam.mx",
role = c("ctb"), comment = c(ORCID = "0000-0002-3166-5801")),
person("Leonardo", "Collado-Torres", role = c("aut"),
email = "lcolladotor@gmail.com",
comment = c(ORCID = "0000-0003-2140-308X")),
person("Alejandro", "Reyes", email = "alejandro.reyes.ds@gmail.com",
role = c("aut"), comment = c(ORCID = "0000-0001-8717-6612"))
)
Description: This package provides an interface to the RegulonDB
http://regulondb.ccg.unam.mx/ database such that you can query it using
R and easily work with Bioconductor packages. This package was created
as a collaboration by members of the Community of Bioinformatics
Software Developers (CDSB in Spanish) https://comunidadbioinfo.github.io/.
License: Artistic-2.0
Encoding: UTF-8
Depends: R (>= 3.6.0)
Imports:
AnnotationDbi,
AnnotationHub,
Biostrings,
data.table,
DBI,
GenomicRanges,
Gviz,
IRanges,
RCy3,
RSQLite,
S4Vectors,
methods,
stats,
utils
LazyData: true
RoxygenNote: 7.0.2
Suggests:
BiocStyle,
knitcitations,
knitr,
rmarkdown,
sessioninfo,
testthat (>= 2.1.0)
URL: https://github.com/ComunidadBioInfo/regutools
BugReports: https://github.com/ComunidadBioInfo/regutools/issues
biocViews: AnnotationData, AnnotationHub, Escherichia_coli,
FunctionalAnnotation, CustomDBSchema
Roxygen: list(markdown = TRUE)
VignetteBuilder: knitr
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josschavezf
jemilianosf
CarBarJon
nturaga
lcolladotor
mtmorgan
lshep
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