bioc-issue-bot
commented
7 years ago Hi @BenjaminAdelaide
Thanks for submitting your package. We are taking a quick look at it and you will hear back from us soon.
The DESCRIPTION file for this package is:
Package: msgbsR
Type: Package
Title: msgbsR: methylation sensitive genotyping by sequencing (MS-GBS) R functions
Version: 0.99.0
Date: 2016-11-11
Author: Benjamin Mayne
Maintainer: Benjamin Mayne <benjamin.mayne@adelaide.edu.au>
Depends: R (>= 3.3.1)
Imports: ggbio, ggplot2, GenomicFeatures, GenomicRanges, GenomeInfoDb, Rsamtools, edgeR, easyRNASeq, R.utils, utils, parallel, plyr, IRanges, S4Vectors, BSgenome.Rnorvegicus.UCSC.rn6
Suggests: BiocGenerics, roxygen2
biocViews: DifferentialMethylation, DataImport, Epigenetics, MethylSeq
Description: Pipeline for the anaysis of a MS-GBS experiment.
License: GPL-2
LazyLoad: yes
Collate: 'rawCounts.R' 'checkCuts.R' 'plotCounts.R' 'diffMeth.R' 'plotCircos.R' 'plotChr.R' 'closestFeat.R'
RoxygenNote: 5.0.1
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