bioc-issue-bot
commented
3 years ago Hi @lgeistlinger
Thanks for submitting your package. We are taking a quick look at it and you will hear back from us soon.
The DESCRIPTION file for this package is:
Package: BioPlex
Title: R-side access to BioPlex protein-protein interaction data
Version: 0.99.1
Authors@R:
c(person("Ludwig", "Geistlinger",
role = c("aut", "cre"),
email = "ludwig_geistlinger@hms.harvard.edu"),
person("Robert", "Gentleman",
role = "aut",
email = "robert_gentleman@hms.harvard.edu"))
Description: The BioPlex package implements access to the BioPlex protein-protein
interaction networks and related resources from within R.
Besides protein-protein interaction networks for HEK293 and HCT116 cells,
this includes access to CORUM protein complex data, and transcriptome
and proteome data for the two cell lines.
Functionality focuses on importing the various data resources and
storing them in dedicated Bioconductor data structures, as a
foundation for integrative downstream analysis of the data.
URL: https://github.com/ccb-hms/BioPlex
BugReports: https://github.com/ccb-hms/BioPlex/issues
Encoding: UTF-8
License: Artistic-2.0
VignetteBuilder: knitr
LazyData: true
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.1.1
Depends:
R (>= 4.0.0),
SummarizedExperiment
Imports:
BiocFileCache,
GEOquery,
graph,
methods,
utils
Suggests:
AnnotationDbi,
AnnotationHub,
BiocStyle,
ExperimentHub,
ExpressionAtlas,
knitr,
rmarkdown
biocViews:
DataImport,
DataRepresentation,
GeneExpression,
GraphAndNetwork,
MassSpectrometry,
Network,
Transcriptomics,
Proteomics,
Homo_sapiens_Data,
ColonCancerData
vjcitn
lgeistlinger
lshep
mtmorgan
hpages
Kayla-Morrell
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