bioc-issue-bot
commented
3 years ago Hi @KlausVigo
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The DESCRIPTION file for this package is:
Package: tanggle
Type: Package
Title: Visualization of Phylogenetic Networks
Version: 0.99.0
Authors@R: c(person("Klaus", "Schliep", email="klaus.schliep@gmail.com", role = c("aut", "cre"), comment = c(ORCID = "0000-0003-2941-0161")),
person("Marta", "Vidal-Garcia", role="aut"),
person("Claudia", "Solis-Lemus", role="aut", email="solislemus@wisc.edu", comment = c(ORCID = "0000-0002-9789-8915")),
person("Leann", "Biancani", role="aut"),
person("Eren", "Ada", role="aut"),
person("L. Francisco", "Henao Diaz", role="aut"),
person("Guangchuang", "Yu", role = c("ctb")))
Description: Offers functions for plotting split (or implicit) networks (unrooted, undirected)
and explicit networks (rooted, directed) with reticulations extending.
'ggtree' and using functions from 'ape' and 'phangorn'. It extends the
'ggtree' package [@Yu2017] to allow the visualization of phylogenetic
networks using the 'ggplot2' syntax. It offers an alternative to the plot
functions already available in 'ape' Paradis and Schliep (2019)
<doi:10.1093/bioinformatics/bty633> and 'phangorn' Schliep (2011)
<doi:10.1093/bioinformatics/btq706>.
Depends:
R (>= 4.1),
ggplot2 (>= 2.2.0),
ggtree
Imports:
ape (>= 5.0),
phangorn (>= 2.5),
utils
Suggests:
tinytest,
BiocStyle,
ggimage,
knitr,
rmarkdown
VignetteBuilder: knitr
biocViews: Software, Visualization, Phylogenetics
License: Artistic-2.0
URL: https://klausvigo.github.io/tanggle, https://github.com/KlausVigo/tanggle
BugReports: https://github.com/KlausVigo/tanggle/issues
RoxygenNote: 7.1.1
Roxygen: list(old_usage = TRUE)
jianhong
KlausVigo
lshep
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