bioc-issue-bot
commented
7 years ago Hi @sbhattacharya3
Thanks for submitting your package. We are taking a quick look at it and you will hear back from us soon.
The DESCRIPTION file for this package is:
Package: IntramiRExploreR
Title: Predicting Targets for Drosophila Intragenic miRNAs
Version: 0.99.0
Authors@R: c(
person("Surajit", "Bhattacharya", email="sbhattacharaya3@student.gsu.edu", role = c("aut", "cre")),
person("Daniel", "Cox", role = "ths"))
Description: Intra-miR-ExploreR, an integrative miRNA target prediction
bioinformatics tool, identifies targets combining expression and biophysical
interactions of a given microRNA (miR). Using the tool, we have identified
targets for 92 intragenic miRs in D. melanogaster, using available microarray
expression data, from Affymetrix 1 and Affymetrix2 microarray array platforms,
providing a global perspective of intragenic miR targets in Drosophila.
Predicted targets are grouped according to biological functions using the DAVID
Gene Ontology tool and are ranked based on a biologically relevant scoring
system, enabling the user to identify functionally relevant targets for a given
miR.
Depends:
R (>= 3.1.2)
Imports:
igraph (>= 1.0.1),
VennDiagram (>= 1.6.17),
FGNet (>= 3.0.7),
knitr (>= 1.12.3)
Suggests:
RDAVIDWebService,
gProfileR,
topGO,
KEGGprofile,
org.Dm.eg.db,
testthat
VignetteBuilder:
knitr
License: GPL-2
biocViews: Software
Encoding: UTF-8
LazyData: true
RoxygenNote: 5.0.1
URL: https://github.com/sbhattacharya3/IntramiRExploreR/
BugReports: https://github.com/sbhattacharya3/IntramiRExploreR/issues
sbhattacharya3
mtmorgan
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