bioc-issue-bot
commented
2 years ago Hi @cpanse
Thanks for submitting your package. We are taking a quick look at it and you will hear back from us soon.
The DESCRIPTION file for this package is:
Package: MsBackendRawFileReader
Type: Package
Title: Bridging Spectra and Thermo Fisher Scientific raw files
Version: 0.99.0
Authors@R: c(person(given = "Christian",
family = "Panse", email = "cp@fgcz.ethz.ch", role = c("aut", "cre"),
comment = c(ORCID = "0000-0003-1975-3064")),
person(given = "Tobias", family = "Kockmann",
email = "Tobias.Kockmann@fgcz.ethz.ch", role = "aut",
comment = c(ORCID = "0000-0002-1847-885X")))
Depends: R (>= 4.1), methods, Spectra (>= 1.2)
Imports:
MsCoreUtils,
S4Vectors,
IRanges,
rawrr (>= 1.1.10),
utils,
BiocParallel
Suggests:
BiocStyle (>= 2.5),
ExperimentHub,
knitr,
lattice,
protViz (>= 0.6),
rmarkdown,
tartare (>= 1.5),
testthat
Description: implements a MsBackend for the Spectra package using
Thermo Fisher Scientific's NewRawFileReader .Net libraries.
The package is generalizing the functionality introduced by the
rawrr package (Kockmann, 2021 <doi:10.1021/acs.jproteome.0c00866 >).
Methods defined in this package are supposed to extend the Spectra
Bioconductor package.
URL: https://github.com/fgcz/MsBackendRawFileReader
BugReports: https://github.com/fgcz/MsBackendRawFileReader/issues
Encoding: UTF-8
NeedsCompilation: yes
biocViews: MassSpectrometry, Proteomics, Metabolomics
RoxygenNote: 7.1.2
License: GPL-3
VignetteBuilder: knitr
Collate:
'hidden_aliases.R'
'AllGenerics.R'
'MsBackendRawFileReader-functions.R'
'MsBackendRawFileReader.R'
'zzz.R'
lshep
cpanse
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