Closed Lionir closed 2 years ago
Hi @Lionir
Thanks for submitting your package. We are taking a quick look at it and you will hear back from us soon.
The DESCRIPTION file for this package is:
Package: octad.db
Title: Open Cancer TherApeutic Discovery (OCTAD) database
Version: 0.99.0
Authors@R:
c(person(given = "E.",
family = "Chekalin",
role = c("aut", "cre"),
email = "eygen.chekalin@gmail.com"),
person(given = "B.",
family = "Zeng",role =c("aut")),
person(given = "B.",
family = "Glicksberg",role ="ctb"),
person(given = "P.",
family = "Newbury",role ="ctb"),
person(given = "J.",
family = "Xing",role ="ctb"),
person(given = "K.",
family = "Liu",role ="ctb"),
person(given = "A.",
family = "Wen",role ="ctb"),
person(given = "D.",
family = "Joseph",role ="ctb"),
person(given = "B.",
family = "Chen",
role ="aut",
email = "chenbi12@msu.edu")
)
Description: Open Cancer TherApeutic Discovery (OCTAD) package implies sRGES approach for the drug discovery. The essential idea is to identify drugs that reverse the gene expression signature of a disease by tamping down over-expressed genes and stimulating weakly expressed ones. The following package contains all required precomputed data for whole OCTAD pipeline computation.
License: Artistic-2.0
Encoding: UTF-8
LazyData: true
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.1.1
Depends:
R (>= 4.0)
biocViews: ExperimentData, CancerData, ExperimentHub, SequencingData, ExpressionData
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Your package has been built on Linux, Mac, and Windows.
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Congratulations! The package built without errors or warnings on all platforms.
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AdditionalPackage: https://github.com/Bin-Chen-Lab/octad
Dear @Lionir ,
The github link provided https://github.com/Bin-Chen-Lab/octad , does not match the capitalization of the github repository: Bin-Chen-Lab/OCTAD. Please update the link for the repository on this issue page.
AdditionalPackage: https://github.com/Bin-Chen-Lab/OCTAD
Dear @Lionir ,
You (or someone) has already posted a repository with the same name to our tracker.
See https://github.com/Bioconductor/Contributions/issues/
You cannot post the same repository more than once and packages are not allowed to have the same name.
If you would like this repository to be linked to issue number: 2391, Please contact a Bioconductor Core Member. I am closing this issue.
Hi, For the last submission, I wasn't able to submit the package with the dependency and was instructed to re-submit the package that can be built without dependencies (octad.db) and submit the additional software package (octad). However, after I tried to submit it, the issue was closed. Can you please address it? Thank you in advance.
Dear @Lionir ,
We have reopened the issue to continue the review process. Please remember to push a version bump to git.bioconductor.org to trigger a new build.
Normally you should have submitted under the original open issue. this involves some clean up on our internal system. Please give us a day or two to straighten it out
Thank you!
@Lionir could you try resubmitting the octad package using the AdditionalPackage line again. I believe we have fixed the issue on our end. Before submitting I would recommend changing the capitalization to be consistent in the DESCRIPTION of the package; R is case sensitive and it does make a difference.
AdditionalPackage: https://github.com/Bin-Chen-Lab/octad
Hi @Lionir, Thanks for submitting your additional package: https://github.com/Bin-Chen-Lab/octad. We are taking a quick look at it and you will hear back from us soon.
Hi, any news regarding the moderation of the package?
sorry for delay. we will process "awaiting moderation" packages shortly.
Additional Package has been approved for building.
IMPORTANT: Please read this documentation for setting up remotes to push to git.bioconductor.org. It is required to push a version bump to git.bioconductor.org to trigger a new build.
Additional Package has been approved for building.
IMPORTANT: Please read this documentation for setting up remotes to push to git.bioconductor.org. It is required to push a version bump to git.bioconductor.org to trigger a new build.
Dear Package contributor,
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Dear Package contributor,
This is the automated single package builder at bioconductor.org.
Your package has been built on Linux, Mac, and Windows.
On one or more platforms, the build results were: "skipped, ERROR". This may mean there is a problem with the package that you need to fix. Or it may mean that there is a problem with the build system itself.
Please see the build report for more details. This link will be active for 21 days.
Remember: if you submitted your package after July 7th, 2020,
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A quick tutorial for setting up remotes and pushing to upstream can be found here.
Additional Package has been approved for building.
IMPORTANT: Please read this documentation for setting up remotes to push to git.bioconductor.org. It is required to push a version bump to git.bioconductor.org to trigger a new build.
Dear Package contributor,
This is the automated single package builder at bioconductor.org.
Your package has been built on Linux, Mac, and Windows.
On one or more platforms, the build results were: "skipped, ERROR". This may mean there is a problem with the package that you need to fix. Or it may mean that there is a problem with the build system itself.
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Remember: if you submitted your package after July 7th, 2020,
when making changes to your repository push to
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A quick tutorial for setting up remotes and pushing to upstream can be found here.
Received a valid push on git.bioconductor.org; starting a build for commit id: c6ff8aa750e89704d88142522a81fde48ff17baa
Dear Package contributor,
This is the automated single package builder at bioconductor.org.
Your package has been built on Linux, Mac, and Windows.
On one or more platforms, the build results were: "skipped, ERROR". This may mean there is a problem with the package that you need to fix. Or it may mean that there is a problem with the build system itself.
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Remember: if you submitted your package after July 7th, 2020,
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Received a valid push on git.bioconductor.org; starting a build for commit id: 9fc8f3c8f86e460fc00be6ecfaf8b68d2d51efd5
Dear Package contributor,
This is the automated single package builder at bioconductor.org.
Your package has been built on Linux, Mac, and Windows.
On one or more platforms, the build results were: "skipped, ERROR". This may mean there is a problem with the package that you need to fix. Or it may mean that there is a problem with the build system itself.
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Hi, I am still waiting for the hub team to approve AWS stored data. I sent an e-mail as required, any news regarding this? Thank you!
Could you please re-send the request to hubs@bioconductor.org, we currently do not see any request.
Thank you. Re-sent the e-mail, can you please check? It was supposed to be from eygen.chekalin@gmail.com. Thank you!
Received a valid push on git.bioconductor.org; starting a build for commit id: bce3d8998c707e23be0025d27d680e6a82a96074
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