bioc-issue-bot
commented
2 years ago Hi @Honchkrow
Thanks for submitting your package. We are taking a quick look at it and you will hear back from us soon.
The DESCRIPTION file for this package is:
Package: SignacSlim
Type: Package
Title: The slim version of signac.
Version: 0.99.0
Authors@R: c(
person(given = 'Wei', family = 'Zhang', email = 'w-zhang16@tsinghua.org.cn', role = c('aut', 'cre'))
)
Maintainer: Wei Zhang <w-zhang16@tsinghua.org.cn>
Description: The slim version of signac.
The package contains the basic classes and methods from SeuratObject,
Seurat and Signac. This package aims to provide upstream function
for developing the scATAC-seq algorithm.
Depends: R (>= 4.1.0), methods, Rcpp, RcppEigen
License: GPL-3 | file LICENSE
Encoding: UTF-8
LinkingTo: Rcpp, RcppEigen
Imports: Rcpp, RcppEigen, GenomeInfoDb, GenomicRanges, IRanges, Matrix,
Rsamtools, fastmatch, future, future.apply, pbapply, tidyr,
BiocGenerics, SeuratObject, biovizBase, dplyr, hdf5r, stringi,
stats, tools, S4Vectors, data.table, methods, ggplot2
Suggests: knitr, testthat
RoxygenNote: 7.1.2
SystemRequirements: C++11
Collate: 'FeatureMatrix.R' 'NucleosomeSignal.R' 'RcppExports.R'
'generics.R' 'fragments.R' 'genomeinfodb-methods.R'
'granges-methods.R' 'iranges-methods.R' 'objects.R'
'reexports.R' 'region-enrichment.R' 'utilities.R'
'visualization.R'
biocViews: Software, Sequencing, ATACSeq, WholeGenome, SingleCell
VignetteBuilder: knitr
NeedsCompilation: yes
Packaged: 2022-03-26 13:07:53 UTC; zhang
Author: Wei Zhang [aut, cre]
vjcitn
lshep
PeteHaitch
Honchkrow
timoast
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