bioc-issue-bot
commented
1 year ago Hi @boyiguo1
Thanks for submitting your package. We are taking a quick look at it and you will hear back from us soon.
The DESCRIPTION file for this package is:
Package: escheR
Title: Unified multi-dimensional visualizations with Gestalt principles
Version: 0.99.0
Authors@R: c(
person("Boyi", "Guo",
email = "boyi.guo.work@gmail.com", role = c("aut", "cre"),
comment = c(ORCID = "0000-0003-2950-2349")),
person(c("Stephanie", "C."), "Hicks", role = c("aut"),
email = "shicks19@jhu.edu",
comment = c(ORCID = "0000-0002-7858-0231"))
)
Description: The creation of effective visualizations is a fundamental component
of data analysis. In biomedical research, new challenges are emerging to
visualize multi-dimensional data in a 2D space, but current data
visualization tools have limited capabilities. To address this problem,
we leverage Gestalt principles to improve the design and interpretability
of multi-dimensional data in 2D data visualizations, layering aesthetics
to display multiple variables. The proposed visualization can be applied
to spatially-resolved transcriptomics data, but also broadly to data
visualized in 2D space, such as embedding visualizations. We provide this
open source R package escheR, which is built off of the state-of-the-art
ggplot2 visualization framework and can be seamlessly integrated into
genomics toolboxes and workflows.
License: MIT + file LICENSE
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.2.3
biocViews:
Spatial,
SingleCell,
Transcriptomics,
Visualization,
Software
Depends:
ggplot2
Imports:
SpatialExperiment (>= 1.6.1),
spatialLIBD,
rlang,
SummarizedExperiment
BugReports: https://github.com/boyiguo1/escheR/issues
URL: https://github.com/boyiguo1/escheR
Suggests:
STexampleData,
knitr,
rmarkdown
VignetteBuilder: knitr
jianhong
boyiguo1
lshep
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