bioc-issue-bot
commented
1 year ago Hi @jfanale26
Thanks for submitting your package. We are taking a quick look at it and you will hear back from us soon.
The DESCRIPTION file for this package is:
Package: CytoMethIC
Type: Package
Title: DNA methylation-based classification and regression
Description: This package provides DNA methylation-based prediction of cancer type, molecular signature and clinical
outcomes. It provides convenience functions for missing value imputation, probe ID conversion, model interpretation
and visualization. The package includes 3 models for classification of 33 tumor types and cell of origin. The package
currently supports HM450, EPIC and EPICv2.
Version: 0.99.0
Authors@R: c(person("Wanding", "Zhou", role = c("aut","cre"),
email = "zhouwanding@gmail.com", comment = c(ORCID = "0000-0001-9126-1932")))
License: Artistic-2.0
Depends: R (>= 4.3.0), ExperimentHub, AnnotationHub
Imports:
tibble,
utils,
stats,
tools,
randomForest
Suggests:
sesame,
testthat,
sesameData,
knitr,
rmarkdown,
e1071,
xgboost,
keras,
tensorflow
biocViews: ExperimentData, MicroarrayData, Genome, ExperimentHub, MethylationArrayData, CancerData, PackageTypeData
VignetteBuilder: knitr
NeedsCompilation: no
RoxygenNote: 7.2.3
Encoding: UTF-8
lshep
jfanale26
jianhong
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