bioc-issue-bot
commented
1 year ago Hi @AliSajid
Thanks for submitting your package. We are taking a quick look at it and you will hear back from us soon.
The DESCRIPTION file for this package is:
Package: drugfindR
Title: Investigate iLINCS for candidate repurposable drugs
Version: 0.99.547
Authors@R: c(
person(given = c("Ali", "Sajid"),
family = "Imami",
role = c("aut", "cre"),
email = "Ali.Sajid.Imami@gmail.com",
comment = c(ORCID = "0000-0003-3684-3539")),
person(given = c("Justin", "Fortune"),
family = "Creeden",
role = c("aut"),
email = "Justin.Creeden@rockets.utoledo.edu",
comment = c(ORCID = "0000-0003-3123-8401")),
person(given = c("Evelyn", "Alden"),
family = "Bates",
role = c("aut"),
email = "Evelyn.Bates@rockets.utoledo.edu",
comment = c(ORCID = "0000-0002-4157-2481")),
person(given = c("Smita"),
family = "Sahay",
role = c("aut"),
email = "Smita.Sahay@rockets.utoledo.edu",
comment = c(ORCID = "0009-0003-4377-8963")))
Description: This package provides a convenient way to access the
LINCS Signatures available in the iLINCS database. These signatures include
Consensus Gene Knockdown Signatures, Gene Overexpression signatures and
Chemical Perturbagen Signatures. It also provides a way to enter your own
transcriptomic signatures and identify concordant and discordant signatures
in the LINCS database.
License: GPL-3 + file LICENSE
Encoding: UTF-8
URL: https://github.com/CogDisResLab/drugfindR
BugReports: https://github.com/CogDisResLab/drugfindR/issues
LazyData: false
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.2.3
biocViews: FunctionalPrediction, DifferentialExpression, GeneSetEnrichment
Imports:
httr,
magrittr,
tibble,
rlang,
dplyr,
purrr,
readr,
stringr,
stats,
lifecycle
Depends:
R (>= 4.3.0)
Suggests:
AnnotationDbi,
biocthis,
codemetar,
devtools,
knitr,
rmarkdown,
testthat (>= 3.0.0)
Config/testthat/edition: 3
Config/testthat/parallel: true
VignetteBuilder: knitr
X-schema.org-applicationCategory: Genomics
X-schema.org-keywords: LINCS, iLINCS, drug repurposing, drug discovery,
transcriptomics, gene expression, gene knockdown, gene overexpression,
chemical perturbagen, drugfindR
X-schema.org-isPartOf: https://bioconductor.org
lshep
AliSajid
hpages
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