bioc-issue-bot
commented
9 months ago Hi @federicomarini
Thanks for submitting your package. We are taking a quick look at it and you will hear back from us soon.
The DESCRIPTION file for this package is:
Package: HCATonsilData
Title: Provide programmatic access to the tonsil cell atlas datasets
Version: 0.99.0
Authors@R: c(person("Ramon", "Massoni-Badosa", role = c("aut", "cre"),
email="ramon.massoni@cnag.crg.eu",
comment = c(ORCID = "0000-0001-7115-8145")),
person("Federico", "Marini", role = c("aut"),
email = "marinif@uni-mainz.de",
comment = c(ORCID = "0000-0003-3252-7758")),
person("Alan", "O'Callaghan", role = c("aut"),
email = "alan.ocallaghan@outlook.com")
)
Description: This package provides access to the scRNA-seq, scATAC-seq,
multiome, CITE-seq and spatial transcriptomics (Visium) data generated
by the tonsil cell atlas in the context of the Human Cell Atlas (HCA).
The data is provided via the Bioconductor project in the form of
SingleCellExperiments. Additionally, information on the whole compendium of
identified cell types is provided in form of a glossary.
License: MIT + file LICENSE
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.2.3
Imports:
ExperimentHub,
SingleCellExperiment,
HDF5Array,
SummarizedExperiment,
htmltools,
rmarkdown,
base64enc,
utils
Suggests:
knitr,
ggplot2,
testthat (>= 3.0.0),
iSEE,
BiocStyle
Config/testthat/edition: 3
VignetteBuilder: knitr
URL: https://github.com/massonix/HCATonsilData
BugReports: https://github.com/massonix/HCATonsilData/issues
biocViews: SingleCellData, ExperimentData, RNASeqData, ExperimentHub, SpatialData
Depends:
R (>= 4.3.0)
federicomarini
massonix
lshep
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