bioc-issue-bot
commented
1 year ago Hi @js2264
Thanks for submitting your package. We are taking a quick look at it and you will hear back from us soon.
The DESCRIPTION file for this package is:
Package: plyinteractions
Title: Extending tidy verbs to genomic interactions
Description: Operate on `GInteractions` objects as tabular data using
`dplyr`-like verbs. The functions and methods in `plyinteractions`
provide a grammatical approach to manipulate `GInteractions`, to
facilitate their integration in genomic analysis workflows.
Version: 0.99.0
Date: 2023-08-21
Authors@R:
c(person("Jacques", "Serizay", , "jacquesserizay@gmail.com",
role = c("aut", "cre")
))
License: Artistic-2.0
URL: https://github.com/js2264/plyinteractions
BugReports: https://github.com/js2264/plyinteractions/issues
biocViews: Software,
Infrastructure
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
Imports:
InteractionSet,
GenomeInfoDb,
BiocGenerics,
GenomicRanges,
plyranges,
IRanges,
S4Vectors,
rlang,
dplyr,
tibble,
tidyselect,
methods,
utils
Suggests:
rtracklayer,
BiocStyle,
covr,
knitr,
rmarkdown,
sessioninfo,
testthat (>= 3.0.0),
RefManageR
Config/testthat/edition: 3
VignetteBuilder: knitr
RoxygenNote: 7.2.3
Collate:
'ginteractions-getters.R'
'DelegatingGInteractions-class.R'
'PinnedGInteractions-class.R'
'AnchoredPinnedGInteractions-class.R'
'GroupedGInteractions-class.R'
'anchor.R'
'annotate.R'
'arrange.R'
'count-overlaps.R'
'count.R'
'data.R'
'filter-overlaps.R'
'filter.R'
'find-overlaps.R'
'flank.R'
'ginteractions-construct.R'
'ginteractions-env.R'
'ginteractions-scoping.R'
'ginteractions-setters.R'
'tbl_vars.R'
'group_data.R'
'group_by.R'
'internals.R'
'join-overlap-left.R'
'methods-show.R'
'mutate.R'
'pin.R'
'reexports-dplyr.R'
'reexports-plyranges.R'
'reexports.R'
'rename.R'
'replace-anchors.R'
'select.R'
'shift.R'
'slice.R'
'stretch.R'
'summarize.R'
LazyData: true
Depends:
R (>= 2.10)
js2264
HelenaLC
lshep
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[x] I have read the Bioconductor Package Submission instructions. My package is consistent with the Bioconductor Package Guidelines.
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