bioc-issue-bot
commented
4 months ago Hi @yuelyu21
Thanks for submitting your package. We are taking a quick look at it and you will hear back from us soon.
The DESCRIPTION file for this package is:
Package: SCIntRuler
Title: Guiding the integration of multiple single-cell RNA-seq datasets
Version: 0.99.0
Authors@R:
person("Yue", "Lyu", , "yuelyu0521@gmail.com", role = c("aut", "cre"),
comment = c(ORCID = "0000-0002-8912-6624"))
Description: The accumulation of single-cell RNA-seq (scRNA-seq) studies highlights the potential benefits of integrating multiple datasets. By augmenting sample sizes and enhancing analytical robustness, integration can lead to more insightful biological conclusions. However, challenges arise due to the inherent diversity and batch discrepancies within and across studies. SCIntRuler, a novel R package, addresses these challenges by guiding the integration of multiple scRNA-seq datasets.
License: MIT + file LICENSE
biocViews: Sequencing, GeneticVariability, SingleCell
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.0
Imports:
Rcpp,
Matrix,
batchelor,
base,
Seurat,
MatrixGenerics,
dplyr,
coin,
devtools,
harmony,
ggplot2,
magrittr,
stats,
devtools
LinkingTo: Rcpp
URL: https://github.com/yuelyu21/SCIntRuler, https://yuelyu21.github.io/SCIntRuler/
BugReports: https://github.com/yuelyu21/SCIntRuler/issues
Suggests:
knitr,
rmarkdown,
testthat (>= 3.0.0)
VignetteBuilder: knitr
Depends:
R (>= 4.3.0)
LazyData: true
LazyDataCompression: xz
Config/testthat/edition: 3
lshep
yuelyu21
LiNk-NY
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