bioc-issue-bot
commented
4 months ago Hi @MicTott
Thanks for submitting your package. We are taking a quick look at it and you will hear back from us soon.
The DESCRIPTION file for this package is:
Package: SpotSweeper
Title: SpotSweeper
Version: 0.99.0
Date: 2023-10-30
Authors@R:
person("Michael", "Totty", ,"mictott@gmail.com", role = c("aut", "cre"),
comment = c(ORCID = "0000-0002-9292-8556"))
Description: Spatially-aware quality control software for detecting and removing low quality spots in spot-based spatial transcritpomics methods, such as 10x Visium.
License: MIT + file LICENSE
URL: https://github.com/MicTott/SpotSweeper, https://mictott.github.io/SpotSweeper/
BugReports: https://support.bioconductor.org/tag/SpotSweeper
biocViews:
Software,
Spatial,
Transcriptomics,
QualityControl,
GeneExpression,
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.2.3
Depends:
R (>= 4.3)
Imports:
SpatialExperiment,
SummarizedExperiment,
BiocNeighbors,
SingleCellExperiment,
stats,
BiocParallel,
MASS,
dbscan
Suggests:
escheR,
knitr,
scuttle,
STexampleData,
ggpubr,
testthat
Config/testthat/edition: 3
VignetteBuilder: knitr
LazyData: true
lazappi
MicTott
lshep
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