bioc-issue-bot
commented
3 months ago Hi @dunstone-a
Thanks for submitting your package. We are taking a quick look at it and you will hear back from us soon.
The DESCRIPTION file for this package is:
Package: multistateQTL
Type: Package
Date: 2024-02-23
Title: Toolkit for the analysis of multi-state QTL data
Version: 0.99.0
Authors@R: c(
person("Christina", "Del Azodi", role=c("aut"), email="cazodi@svi.edu.au"),
person("Davis","McCarthy", role=c("ctb"), email="dmccarthy@svi.edu.au"),
person("Amelia","Dunstone", role=c("cre", "ctb"), email="amelia.dunstone@svi.edu.au", comment=c(ORCID="0009-0009-6426-1529")))
Description: A collection of tools for doing various analyses of
multi-state QTL data, with a focus on visualization and interpretation.
The package 'multistateQTL' contains functions which can remove or impute
missing data, identify significant associations, as well as categorise features into global,
multi-state or unique. The analysis results are stored in a 'QTLExperiment' object,
which is based on the 'SummarisedExperiment' framework.
License: GPL-3
URL: https://github.com/dunstone-a/multistateQTL
BugReports: https://github.com/dunstone-a/multistateQTL/issues
Encoding: UTF-8
Depends:
QTLExperiment,
SummarizedExperiment,
ComplexHeatmap,
data.table,
collapse
Imports:
methods,
S4Vectors,
grid,
dplyr,
tidyr,
matrixStats,
stats,
fitdistrplus,
viridis,
ggplot2,
circlize,
mashr,
grDevices
Suggests:
testthat,
BiocStyle,
knitr,
covr,
rmarkdown
biocViews: FunctionalGenomics, GeneExpression, Sequencing, Visualization, SNP, Software
VignetteBuilder: knitr
RoxygenNote: 7.3.1
DarioS
dunstone-a
lshep
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