bioc-issue-bot
commented
3 months ago Hi @estellad
Thanks for submitting your package. We are taking a quick look at it and you will hear back from us soon.
The DESCRIPTION file for this package is:
Package: SpatialExperimentIO
Title: Read in Xenium, CosMx, MERSCOPE or STARmapPLUS data as SpatialExperiment object
Version: 0.99.0
Authors@R: c(
person("Yixing E.", "Dong",
email = "estelladong729@gmail.com",
role = c("aut", "cre"),
comment = c(ORCID = "0009-0003-5115-5686")))
URL: https://github.com/estellad/SpatialExperimentIO
BugReports: https://github.com/estellad/SpatialExperimentIO/issues
Description: Read in imaging-based spatial transcriptomics technology data. Current available modules are for Xenium by 10X Genomics, CosMx by Nanostring, MERSCOPE by Vizgen, or STARmapPLUS from Broad Institute. You can choose to read the data in as a SpatialExperiment or a SingleCellExperiment object.
License: Artistic-2.0
Encoding: UTF-8
VignetteBuilder: knitr
Roxygen: list(markdown = TRUE)
Imports:
DropletUtils,
SpatialExperiment,
SingleCellExperiment,
methods,
utils
Suggests:
knitr,
rmarkdown,
testthat (>= 3.0.0),
BiocStyle
biocViews:
DataRepresentation,
DataImport,
Infrastructure,
Transcriptomics,
SingleCell,
Spatial,
GeneExpression
RoxygenNote: 7.3.1
Config/testthat/edition: 3
lshep
DarioS
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