Closed LiNk-NY closed 4 months ago
Hi @LiNk-NY
Thanks for submitting your package. We are taking a quick look at it and you will hear back from us soon.
The DESCRIPTION file for this package is:
Package: AnVILBase
Title: Generic functions for interacting with the AnVIL ecosystem
Version: 0.99.22
Authors@R: c(
person("Marcel", "Ramos", , "marcel.ramos@roswellpark.org",
c("aut", "cre"), c(ORCID = "0000-0002-3242-0582")),
person("Martin", "Morgan", , , c("aut", "ctb"),
c(ORCID = "0000-0002-5874-8148")),
person("NIH NHGRI U24HG004059", role = "fnd")
)
Description: Provides generic functions for interacting with the AnVIL
ecosystem. Packages that use either GCP or Azure in AnVIL are built on top
of AnVILBase. Extension packages will provide methods for interacting with
other cloud providers.
License: Artistic-2.0
Imports:
httr,
httr2,
dplyr,
jsonlite,
methods,
tibble
Suggests:
AnVILAz,
AnVILGCP,
BiocStyle,
knitr,
rmarkdown,
testthat (>= 3.0.0),
tinytest
biocViews: Software, Infrastructure
URL: https://github.com/Bioconductor/AnVILBase
BugReports: https://github.com/Bioconductor/AnVILBase/issues
VignetteBuilder: knitr
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.1
Date: 2024-03-23
Config/testthat/edition: 3
Collate:
'AnVILBase-generics.R'
'AnVILBase-methods.R'
'AnVILBase-package.R'
'Platform-class.R'
'Response.R'
'avdata-generics.R'
'avdata-methods.R'
'avnotebooks-generics.R'
'avnotebooks-methods.R'
'avtable-generics.R'
'avtable-methods.R'
'avworkflow-generics.R'
'avworkflow-methods.R'
'avworkspace-generics.R'
'avworkspace-methods.R'
'cloud_platform.R'
'utilities.R'
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Dear Package contributor,
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AdditionalPackage: https://github.com/Bioconductor/AnVILAz
Hi @LiNk-NY, Thanks for submitting your additional package: https://github.com/Bioconductor/AnVILAz. We are taking a quick look at it and you will hear back from us soon.
I can't process AnVILAz because it does not have biocViews in description
I can't process AnVILAz because it does not have biocViews in description
@lshep Sorry about that. I have added some terms. Thanks!
Additional Package has been approved for building.
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Additional Package has been approved for building.
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Additional Package has been approved for building.
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Sorry @LiNk-NY not sure why this triggered multiple builds
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AdditionalPackage: https://github.com/Bioconductor/AnVILGCP
Hi @LiNk-NY, Thanks for submitting your additional package: https://github.com/Bioconductor/AnVILGCP. We are taking a quick look at it and you will hear back from us soon.
Hi @lshep
Can AnVILGCP
be run through the SPB? Thank you.
DataStorageAndAnalysis is not a valid biocViews term and causing issues when processing
@lshep Sorry about that. I fixed it.
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Hi Kayla, @Kayla-Morrell
I hope you are doing well. The review has been pending for a bit. I am sure you are busy with other things.
Should someone else be assigned, Lori? @lshep
Thank you.
Best regards, Marcel
@LiNk-NY - Sorry for the delay. The review of the packages are below. The required changes must be made while the suggested changes do not have to be (though we strongly encourage them). Comment back here with updates that have been made and when the packages are ready for a re-review.
R CMD check
did not finish because of the other AnVIL packages suggests. Any issues should be corrected once this is resolved and can complete.Best, Kayla
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