bioc-issue-bot
commented
3 months ago Hi @ncborcherding
Thanks for submitting your package. We are taking a quick look at it and you will hear back from us soon.
The DESCRIPTION file for this package is:
Package: immApex
Title: Tools for Adaptive Immune Receptor Sequence-Based Keras Modeling
Version: 0.99.0
Date: 2024-07-15
Authors@R: c(
person(given = "Nick", family = "Borcherding", role = c("aut", "cre"), email = "ncborch@gmail.com"))
Description: A set of tools to build tensorflow/keras-based models in R from amino acid and nucleotide sequences focusing on adaptive immune receptors. The package includes pre-processing of sequences, unifying gene nomenclature usage, encoding sequences, and combining models. This package will serve as the basis of future immune receptor sequence functions/packages/models compatible with the scRepertoire ecosystem.
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
LazyDataCompression: xz
RoxygenNote: 7.3.1
biocViews: Software, ImmunoOncology, SingleCell, Classification, Annotation, Sequencing
Depends:
R (>= 4.0)
Imports: dplyr,
hash,
httr,
keras,
matrixStats,
methods,
rvest,
SingleCellExperiment,
stats,
stringi,
stringr,
tensorflow
Suggests:
BiocStyle,
ggplot2,
knitr,
markdown,
rmarkdown,
scRepertoire,
spelling,
testthat,
viridis
VignetteBuilder: knitr
Language: en-US
URL: https://github.com/ncborcherding/Apex/
BugReports: https://github.com/ncborcherding/Apex/issues
lshep
ncborcherding
PeteHaitch
LiNk-NY
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