bioc-issue-bot
commented
1 month ago Hi @js2264
Thanks for submitting your package. We are taking a quick look at it and you will hear back from us soon.
The DESCRIPTION file for this package is:
Package: EnsemblGenomes
Title: Rapid access to Ensembl-provided genome reference and annotation files
Description: EnsemblGenomes scrapes ensembl.org and ensemblgenomes.org FTP
servers to locate genome reference fasta files and genome annotation
gff3 files provided for species supported by Ensembl. As of July 2024,
this corresponds to more than 300 vertebrate, 300 metazoa, 200 protists,
150 plants, 1,000 fungi and 30,000 bacteria species. Rather than supporting
`BiocFileCache`, EnsemblGenomes simply intends to retrieve and list URL
of fasta and gff3 files across Ensembl releases as a plain data frame.
Version: 0.99.0
Date: 2024-07-26
Authors@R:
person("Jacques", "Serizay", , "jacquesserizay@gmail.com", role = c("aut", "cre"))
License: MIT + file LICENSE
URL: https://github.com/js2264/EnsemblGenomes
BugReports: https://github.com/js2264/EnsemblGenomes/issues
biocViews:
Software,
Sequencing
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.2.3
Depends:
R (>= 4.3.0)
Imports:
httr,
rvest,
glue,
tibble,
dplyr,
stringr,
cli
Suggests:
knitr,
quarto,
rmarkdown,
sessioninfo,
testthat (>= 3.0.0),
BiocStyle,
RefManageR
Config/testthat/edition: 3
VignetteBuilder: knitr
LazyData: false
js2264
lshep
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