bioc-issue-bot
commented
6 days ago Hi @jorainer
Thanks for submitting your package. We are taking a quick look at it and you will hear back from us soon.
The DESCRIPTION file for this package is:
Package: MsBackendMetaboLights
Title: Retrieve Mass Spectrometry Data from MetaboLights
Version: 0.99.0
Authors@R:
c(person(given = "Johannes", family = "Rainer",
email = "Johannes.Rainer@eurac.edu",
role = c("aut", "cre"),
comment = c(ORCID = "0000-0002-6977-7147")),
person(given = "Philippine", family = "Louail",
email = "philippine.louail@eurac.edu",
role = c("aut"),
comment = c(ORCID = "0009-0007-5429-6846")))
Description: MetaboLights is one of the main public repositories for storage
of metabolomics experiments, which includes analysis results as
well as raw data. The MsBackendMetaboLights package provides
functionality to retrieve and represent mass spectrometry (MS)
data from MetaboLights. Data files are downloaded and cached
locally avoiding repetitive downloads. MS data from metabolomics
experiments can thus be directly and seamlessly integrated into
R-based analysis workflows with the Spectra and
MsBackendMetaboLights package.
Depends:
R (>= 4.2.0)
Imports:
curl,
ProtGenerics,
Spectra,
BiocFileCache,
methods
Suggests:
testthat,
rmarkdown,
mzR,
knitr,
BiocStyle
License: Artistic-2.0
Encoding: UTF-8
VignetteBuilder: knitr
BugReports: https://github.com/RforMassSpectrometry/MsBackendMetaboLights/issues
URL: https://github.com/RforMassSpectrometry/MsBackendMetaboLights
biocViews: Infrastructure, MassSpectrometry, Metabolomics, DataImport, Proteomics
Roxygen: list(markdown=TRUE)
RoxygenNote: 7.3.2
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