bioc-issue-bot
commented
1 month ago Hi @FeiLiyang
Thanks for submitting your package. We are taking a quick look at it and you will hear back from us soon.
The DESCRIPTION file for this package is:
Package: Barbie
Type: Package
Title: Analyze Barcode Data from Clonal Tracking Experiments
Version: 0.99.0
Description: The Barbie package provides a suite of robust statistical tools
for analysing Barcode count data generated from clonal tracking experiments.
By tracking the incorporation of unique DNA Barcodes into progenitor cells
and sequencing the Barcodes from progeny cells, researchers can quantify
clonal populations and assess their dynamics before and after experimental
perturbations. Barbie covers data preprocessing, statistical testing, and
visualizations.
Authors@R:
c(person(given = "Liyang",
family = "Fei",
role = c("aut", "cre"),
email = "liyang.fei@petermac.org",
comment = c(ORCID = "0000-0002-3293-2094"))
)
License: GPL-3
LazyData: FALSE
Encoding: UTF-8
VignetteBuilder: knitr
Suggests:
knitr,
rmarkdown,
testthat (>= 3.0.0)
Imports:
magrittr,
tidyr,
dplyr,
grid,
circlize,
ComplexHeatmap,
ggplot2,
logistf,
limma,
stats,
igraph,
utils,
data.table
biocViews: Sequencing, Regression, Preprocessing, Visualization
BugReports: https://github.com/Oshlack/Barbie
URL: https://github.com/Oshlack/Barbie/issues
RoxygenNote: 7.3.2
Config/testthat/edition: 3
Depends:
R (>= 4.4.0)
Roxygen: list(markdown = TRUE)
lshep
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