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microbiome #388

Closed antagomir closed 7 years ago

antagomir commented 7 years ago

GitHub repository of the package we wish to submit to Bioconductor

Note: this is a resubmission of the microbiome package in Bioconductor after the package has been completely rewritten following the feedback from H. Pages in 10/2014 (tracker.fhcrc.org/roundup/bioc_submit/issue1031). Therefore the verrsion number is 0.99.2 rather than 0.99.0 but the submission system has changed and as far as I can see, opening a new issue is the cleanest way to get forward.

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antagomir commented 7 years ago

Master branch is now 1.7Mb. I hope that all issues are now solved and the package can be added to BioC.

mtmorgan commented 7 years ago

Thanks Leo

The master branch of your GitHub repository has been added to Bioconductor's git repository.

Your ssh public keys have been added; you can access your Bioconductor repository using the corresponding private key(s); the command

ssh git@git.bioconductor.org

should include a line like

R W    packages/YOUR_PACKAGE_NAME

indicating read / write access is available.

See further instructions at

https://bioconductor.org/developers/how-to/git/

for working with this repository. See especially

https://bioconductor.org/developers/how-to/git/new-package-workflow/ https://bioconductor.org/developers/how-to/git/sync-existing-repositories/

to keep your GitHub and Bioconductor repositories in sync.

Your package will be included in the next nigthly 'devel' build (check-out from git at about 6 pm Eastern; build completion around 2pm Eastern the next day) at

https://bioconductor.org/checkResults/

(Builds sometimes fail, so ensure that the date stamps on the main landing page are consistent with the addition of your package). Once the package builds successfully, you package will be available for download in the 'Devel' version of Bioconductor using biocLite("YOUR_PACKAGE_NAME"). The package 'landing page' will be created at

https://bioconductor.org/packages/YOUR_PACKAGE_NAME

If you have any questions, please contact the bioc-devel mailing list (https://stat.ethz.ch/mailman/listinfo/bioc-devel); this issue will not be monitored further.