Closed mixOmicsTeam closed 5 years ago
Dear @mixOmicsTeam ,
I could not find a DESCRIPTION file in the default branch of the GitHub repository at https://github.com/mixOmicsTeam/mixOmics . This repository should contain an R package.
I am closing this issue. Please try again with a new issue.
Update the following URL to point to the GitHub repository of the package you wish to submit to Bioconductor
mixOmics has been on CRAN since 2009 and we finally decided to convert to bioC. It is a big move for us and we are aware that our current submission needs further improvements. We hope to be able to stage some of our developments gradually. The future improvements we envisage in particular are to set up setGeneric and setMethods functions to fit in MultiAssayExperiments. We have not been successful so far and we need more time. We hope that mixOmics will benefit the bioC community and attract more users! You can see our engagement and commitment with the computational biology community at www.mixOmics.org
Confirm the following by editing each check box to '[x]'
Confirm the following by editing each check box to '[x]'
[x] I understand that by submitting my package to Bioconductor, the package source and all review commentary are visible to the general public.
[x] I have read the Bioconductor Package Submission instructions. My package is consistent with the Bioconductor Package Guidelines.
[see below] I understand that a minimum requirement for package acceptance is to pass R CMD check and R CMD BiocCheck with no ERROR or WARNINGS. Passing these checks does not result in automatic acceptance. The package will then undergo a formal review and recommendations for acceptance regarding other Bioconductor standards will be addressed. R CMD check --as-cran gives 3 NOTES, all OK for bioconductor R CMD BiocCheck gives:
cpus
argument in some of our functions, let me know if there is a work around this[x] My package addresses statistical or bioinformatic issues related to the analysis and comprehension of high throughput genomic data. Yes! see www.mixOmics.org, mixOmics is an R toolkit for omics data integration.
[x] I am committed to the long-term maintenance of my package. This includes monitoring the support site for issues that users may have, subscribing to the bioc-devel mailing list to stay aware of developments in the Bioconductor community, responding promptly to requests for updates from the Core team in response to changes in R or underlying software.
I am familiar with the essential aspects of Bioconductor software management, including:
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