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Bioconductor / DelayedArray

A unified framework for working transparently with on-disk and in-memory array-like datasets
https://bioconductor.org/packages/DelayedArray
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`is_pristine()` error #55

Closed mjsteinbaugh closed 4 years ago

mjsteinbaugh commented 4 years ago

Hi guys, I'm seeing some of my code in basejump error out on bioc-devel due to is_pristine() in DelayedArray 0.11.8. Here's the relevant traceback:

rowSums(object)
.local(x, rows, cols, na.rm, dim., ...)
DelayedArray:::is_pristine
get(name, envir = asNamespace(pkg), inherits = FALSE)

Affected functions in basejump, for reference:

Best, Mike

hpages commented 4 years ago

Hi @mjsteinbaugh,

Can you please provide a reproducible example and your sessionInfo()?

Thanks!

mjsteinbaugh commented 4 years ago

Sure I'll work on a reprex and get back to you.

hpages commented 4 years ago

@mjsteinbaugh Are you planning to follow up on this? Thx! H.

mjsteinbaugh commented 4 years ago

@hpages Yes I'll work on a reprex this week and get back to you

mjsteinbaugh commented 4 years ago

@hpages Since Bioconductor 3.10 is out today, I think this issue is safe to close for the time being. If I see this pop up again, I'll reopen the issue. Thanks Hervé!

hpages commented 4 years ago

No problem. Thx!