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Bioconductor / ExperimentHub

Client to access ExperimentHub resources
https://bioconductor.org/packages/ExperimentHub
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resources failed to download #34

Open kazaguls opened 1 year ago

kazaguls commented 1 year ago

Hi, I am trying to get the celldex::MousebulkRNA-seq() and get the following error. I've tried to run on both mac and windows with the same error. Any advice on how to rectify appreciated. Error: failed to load resource name: EH3498 title: Mouse bulk RNA-seq logcounts reason: 1 resources failed to download In addition: Warning messages: 1: download failed web resource path: ‘https://experimenthub.bioconductor.org/fetch/3514’ local file path: ‘/Users/kazaguls/Library/Caches/org.R-project.R/R/ExperimentHub/28a13accacd0_3514’ reason: Conflict (HTTP 409). 2: bfcadd() failed; resource removed rid: BFC12 fpath: ‘https://experimenthub.bioconductor.org/fetch/3514’ reason: download failed 3: download failed hub path: ‘https://experimenthub.bioconductor.org/fetch/3514’ cache resource: ‘EH3498 : 3514’ reason: bfcadd() failed; see warnings()

PeteHaitch commented 1 year ago

There is an temporary issue with the ExperimentHub service that is being looked into (https://github.com/Bioconductor/ExperimentHub/issues/33#issuecomment-1768418384). I think you'll just need to wait until this is fixed.

kazaguls commented 1 year ago

Ok, good to know. Thank you very much!

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From: Peter Hickey @.> Sent: Wednesday, October 18, 2023 6:26:30 PM To: Bioconductor/ExperimentHub @.> Cc: kazaguls @.>; Author @.> Subject: Re: [Bioconductor/ExperimentHub] resources failed to download (Issue #34)

There is an temporary issue with the ExperimentHub service that is being looked into (#33 (comment)https://github.com/Bioconductor/ExperimentHub/issues/33#issuecomment-1768418384). I think you'll just need to wait until this is fixed.

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lshep commented 2 months ago

Has this been resolved? I can download this locally? 

 temp = eh[["EH3498"]]
see ?celldex and browseVignettes('celldex') for documentation
downloading 1 resources
retrieving 1 resource
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