Is there any way to use the package with data release v12?

Bioconductor / GenomicDataCommons

Provide R access to the NCI Genomic Data Commons portal.

http://bioconductor.github.io/GenomicDataCommons/

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Is there any way to use the package with data release v12? #104

Closed shadihames closed 2 years ago

shadihames commented 2 years ago

There seems to have been a pretty extensive overhaul of the files within the GDC environment for the v32 release in March - different file uuids and file names. For those of us who can't download this new data yet, is there any way to use GenomicDataCommons with a previous release (v12)? It's such a great tool to make sense of the file naming system, I'm not sure of how else I can go about matching uuids without the package.

Thanks.

LiNk-NY commented 2 years ago

Those files are no longer available. See https://github.com/waldronlab/TCGAutils/issues/31