Closed RichardJActon closed 5 years ago
Ah found the base url change in https://github.com/Bioconductor/GenomicDataCommons/blob/master/R/constants.R
installed the development version direct from github and that fixed the issue - it would be good if this change got pushed to Bioconductor soon though.
I installed the genomicDataCommons R package, as bellow:
Then ran the connection check, and go this error:
Doing:
httr::GET('http://gdc-api.nci.nih.gov/status')
returns an identical error, but doing the below works fine:So there does not seem to be an issue with curl/httr working for other things I've tried updating and/or reinstalling all the relevant packages as suggested in https://github.com/Bioconductor/GenomicDataCommons/issues/35 and https://stackoverflow.com/questions/35055715/ssl-connect-error-in-httr-curl. my command line curl is behaving consistently with my R curl - that is to say, not working for http://gdc-api.nci.nih.gov/status
Any suggestings for resolving this?
SessionInfo: