Closed const-ae closed 3 years ago
Hi,
I am trying to use a function from MatrixGenerics using the :: notation. However, it only works on the second attempt:
MatrixGenerics
::
library(Matrix) mat <- matrix(1:32, nrow = 8, ncol = 4) sp_mat <- as(mat, "dgCMatrix") showMethods(MatrixGenerics::colSums2) #> Function: colSums2 (package MatrixGenerics) #> x="ANY" #> x="matrix_OR_array_OR_table_OR_numeric" MatrixGenerics::colSums2(mat) #> [1] 36 100 164 228 showMethods(MatrixGenerics::colSums2) #> Function: colSums2 (package MatrixGenerics) #> x="ANY" #> x="matrix" #> (inherited from: x="matrix_OR_array_OR_table_OR_numeric") #> x="matrix_OR_array_OR_table_OR_numeric" MatrixGenerics::colSums2(sp_mat) #> Error in get(as.character(FUN), mode = "function", envir = envir): object 'colSums2' of mode 'function' was not found showMethods(MatrixGenerics::colSums2) #> Function: colSums2 (package MatrixGenerics) #> x="ANY" #> x="matrix_OR_array_OR_table_OR_numeric" #> x="xgCMatrix" MatrixGenerics::colSums2(sp_mat) #> [1] 36 100 164 228
Created on 2021-06-25 by the reprex package (v2.0.0)
I assume this is related to the whole discussion in https://github.com/Bioconductor/MatrixGenerics/pull/16#issuecomment-707545240. @hpages, do you know what is causing this and what we can do to fix this?
Best, Constantin
PR #26 fixes the issue (I think), but it would be good if someone could look it over because this was a very deep dive for me into function environments, and my head is still buzzing
Hi,
I am trying to use a function from
MatrixGenerics
using the::
notation. However, it only works on the second attempt:Created on 2021-06-25 by the reprex package (v2.0.0)
I assume this is related to the whole discussion in https://github.com/Bioconductor/MatrixGenerics/pull/16#issuecomment-707545240. @hpages, do you know what is causing this and what we can do to fix this?
Best, Constantin