People are occasionally worried about losing a cell type due to filtering. A more relaxed approach to QC would be to retain information about which cells are low-quality without actually discarding them, to facilitate downstream interpretation if weaker filtering is required to recover cell types with low RNA content.
People are occasionally worried about losing a cell type due to filtering. A more relaxed approach to QC would be to retain information about which cells are low-quality without actually discarding them, to facilitate downstream interpretation if weaker filtering is required to recover cell types with low RNA content.