Closed mohammedemamkhattabunipd closed 6 months ago
Hi, sorry to hear about this; does your R configuration give answers consistent with those at https://bioconductor.org/checkResults/3.18/bioc-mac-arm64-LATEST/kjohnson1-NodeInfo.html ?
Any reason you need to compile Rsamtools yourself?
Compilation problems on Mac can be easily avoided by installing the package binaries that we provide. Note that installing package binaries is actually the default if you use the R binary for Mac arm64 available at https://cran.r-project.org/bin/macosx/ (pick up R-4.3.3-arm64.pkg
). In addition to solving compilation issues, this makes package installations much faster.
If for some reason using R-4.3.3-arm64.pkg
is not an option for you, try BiocManager::install("Rsamtools", type="mac.binary.big-sur-arm64")
.
It worked with BiocManager::install("Rsamtools", type="mac.binary.big-sur-arm64")
thanks a lot.
Describe the bug Trying to install Rsamtools through BiocManager, but im getting the following compilation error:
To Reproduce Run
BiocManager::install("Rsamtools")
.Expected behavior The package should be compiled correctly.
sessionInfo Please report the output of
sessionInfo()
here.