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Bioconductor / VariantAnnotation

Annotation of Genetic Variants
https://bioconductor.org/packages/VariantAnnotation
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Can geno() obtain the reference depth and alternate allele separately? #48

Open lihe-s opened 2 years ago

vjcitn commented 2 years ago

Sorry for delay in responding. It would be nice to have an example. Can you point me to a VCF file with the content you are trying to extract?