Would be useful to filter a VCF incrementally by range. Range-based iteration makes sense when e.g. removing duplicates. Right now filterVcf() only works by yield count. The GenomicFiles package makes reduction easier but not necessarily filtering at the file level. At least, side effects are undesirable in that functional framework.
Would be useful to filter a VCF incrementally by range. Range-based iteration makes sense when e.g. removing duplicates. Right now
filterVcf()only works by yield count. The GenomicFiles package makes reduction easier but not necessarily filtering at the file level. At least, side effects are undesirable in that functional framework.