Bioconductor / basilisk

Clone of the Bioconductor repository for the basilisk package.
https://bioconductor.org/packages/devel/bioc/html/basilisk.html
GNU General Public License v3.0
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How to change the conda mirrors managed by Basilisk? #41

Open chenxing-zhang opened 2 months ago

chenxing-zhang commented 2 months ago

Hi, i have installed basilisk in R (for ubuntu 22). when i run "BasiliskEnvironment", i found that the download speed for Python packages from conda's official mirror is too slow. How to change the conda mirrors managed by Basilisk? Is there a .condarc file available for configuration?

LTLA commented 2 months ago

Oops, forgot to reply to this.

Right now basilisk will just respect the user's .condarc, so I guess you could just modify that.

That said, this is kind-of-a-bug as it may cause basilisk to generate different environments based on external files outside of basilisk's control; it will be closed by #40.